Buckwheat genome
WebCommon buckwheat (Fagopyrum esculentum) and Tartary buckwheat (Fagopyrum tataricum), the two most widely cultivated buckwheat species, differ greatly in flavonoid content and reproductive mode. Here, we report the first high-quality and chromosome-level genome assembly of common buckwheat with 1.2 Gb. Webbuckwheat allows us to study the tissue and expression profiles of the ZF-HD gene family in Tartary buckwheat on a genome-wide basis. Results: In this study, the whole genome and expression profile of the ZF-HD gene family were analyzed for the first time in Tartary buckwheat. We identified 20 FtZF-HD genes and divided them into MIF and ZHD ...
Buckwheat genome
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WebA total of 76 FtWRKY genes identified from the Tartary buckwheat genome were divided into three groups. FtWRKY genes in the same group had similar gene structures and motif compositions. Despite the lack of tandem-duplicated gene pairs, there were 23 pairs of segmental-duplicated gene pairs. WebJun 14, 2024 · Here, we assembled a high-quality chromosome-level genome of golden buckwheat and found a one-to-one syntenic relationship with the chromosomes of …
WebDec 7, 2024 · To characterize the Tartary buckwheat Dingku1 methylome during cold stress, a whole-genome bisulfite sequencing was performed and single-base resolution maps of DNA methylation were generated for three test groups: the control group (normal temperature), cold memory group (priming: 4°C for 6 h, followed by 21°C for 18 h, … WebJul 13, 2024 · Buckwheat (Polygonaceae) is a pseudocereal with two major species of agricultural significance: common buckwheat ( Fagopyrum esculentum Moench, sweet buckwheat) and tartary buckwheat ( Fagopyrum tataricum (L.) Gaertn., bitter buckwheat) (Ohnishi 1998; Logacheva et al. 2011 ).
WebNov 1, 2024 · After eliminating the redundant sequences, in total 38 FtNF-Y genes were identified from the Tartary buckwheat genome via the two BLASTp methods, including 12 FtNF-YAs, 17 FtNF-YBs and 9 FtNF-YCs (Table 1).In the study, we renamed the FtNF-Y genes according to their subfamily branch and chromosome locations, naming them from … WebFeb 3, 2024 · Results. Here, we identified 16 FtMAPKs in the Fagopyrum tataricum genome. Phylogenetic analysis showed that the FtMAPK family members could be …
WebMar 16, 2024 · Here, we report the assembly of the buckwheat genome using long-read technology and a high-resolution expression atlas including 46 organs and …
WebJul 15, 2024 · We obtained information from the Tartary buckwheat genome database by Circos based on chromosomal gene locations. Then, the genes distributing on 8 chromosomes of Tartary buckwheat were analyzed [46]. Next, we used several toolkits (MCScanX) that scan bHLH genes for collinearity to detect gene duplication events [47]. goat gift shopWebJan 1, 2016 · The promising news is that buckwheat draft genome sequencing is in progress (Logacheva et al., 2014). Approximately 70% of the genome sequencing has been done, and a total sequence length of ∼530 megabases and ∼30 thousands genes are expected when sequencing is complete. Buckwheat genome sequencing and full gene … goat gifts for himWebSep 1, 2024 · Here we report a high-quality, chromosome-scale Tartary buckwheat genome sequence of 489.3 Mb that is assembled by combining whole genome shotgun sequencing of both Illumina short reads and … bonefish brookfield wibonefish brunch couponsWebAug 7, 2024 · The genome of tartary buckwheat has recently been reported and provides a theoretical basis for our research on the characteristics and expression of trihelix genes in tartary buckwheat based at the whole level. In the present study, a total of 31 FtTH genes were identified based on the buckwheat genome. They were named from FtTH1 to … bonefish brookfieldWebApr 5, 2024 · Genome-wide identification, gene structure, and motif contribution in representative Cucurbitaceae species ... Genome-wide analysis of the NF-Y gene family and their roles in relation to fruit development in Tartary buckwheat (Fagopyrum tataricum) Int. J. Biol. Macromol., 190 (2024), pp. 487-498. View PDF View article View in Scopus … bonefish brunchWebFeb 2, 2024 · As a drought-tolerant crop, Tartary buckwheat survives under adverse environmental conditions, including drought stress. Proanthocyanidins (PAs) and anthocyanins are flavonoid compounds, and they participate in the regulation of resistance to both biotic and abiotic stresses by triggering genes’ biosynthesis of flavonoids. In this … bonefish brunch menu pdf